Browsing by Subject "Demethylation inhibitor"

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    Characterisation of the sensitivity of Zymoseptoria tritici to demethylation inhibitors in Europe
    (2021) Huf, Anna; Vögele, Ralf
    The fungal pathogen Zymoseptoria tritici (formerly Septoria tritici) causes Septoria tritici blotch (STB), one of the most yield reducing diseases of wheat worldwide. In addition to cultural control measures and the cultivation of wheat varieties with a level of disease resistance, STB control relies heavily on the application of foliar fungicides with different modes of action. The demethylation inhibitors (DMIs) have been one of the most widely applied fungicides for many decades and belong to one of the most important fungicide modes of action in STB management. DMIs inhibit the sterol 14α-demethylase, an essential enzyme in the ergosterol biosynthesis pathway, encoded by the CYP51 gene of fungi. Widespread and intensive use of the DMIs over time has led to a continuous negative shift in the sensitivity of Z. tritici towards DMIs that have been used for a long time. This shift in sensitivity is mainly driven by the accumulation of mutations in the CYP51 gene resulting in the selection of various CYP51 haplotypes. More recently, CYP51 overexpression and an increased efflux activity, based on the overexpression of the MFS1 transporter, have been shown to be additional mechanisms affecting DMI sensitivity of Z. tritici. Inserts in the CYP51 promotor (CYP51p) and MFS1 promotor (MFS1p) were observed to be responsible for CYP51 and MFS1 overexpression. The prevalence and contribution of different DMI resistance mechanisms to a reduced DMI sensitivity of Z. tritici were investigated in isolates from across Europe in 2016 and 2017. The CYP51 gene of all isolates was sequenced and the CYP51p and MFS1p was investigated for inserts in order to determine the character of the CYP51 haplotypes as well as to identify CYP51 overexpression or if an increased efflux activity was occurring in these isolates. Overall, it was shown that the occurrence of CYP51 haplotypes was still the most frequent and important mechanism conferring a reduction in sensitivity to DMIs by Z. tritici in Europe. Nevertheless, an increase in the frequency of isolates exerting CYP51 overexpression and those exhibiting increased efflux activity was observed compared to earlier studies. Glasshouse data demonstrated that DMIs can still contribute to disease control, and in some cases give full control, of STB even if isolates expressed CYP51 overexpression and/or an increased efflux in addition to also carrying moderately or highly adapted CYP51 haplotypes. However, in order to prevent the further increase and spread of further adapted CYP51 haplotypes plus additional resistance mechanisms in the Z. tritici population across Europe, anti-resistance-management strategies should be a high priority in the use of DMIs. In addition, especially integrated disease management strategies, such as the appropriate choice of cultivars, should be applied in order to keep STB disease pressure low and consequently reduce the number of fungicide applications. Moreover, resistance-management strategies may exploit the limited cross-resistance between different DMIs, for example, by the use of mixtures or alternation of different DMI fungicides. However, control strategies should also incorporate the use of fungicides with different MOAs. The aim of all these strategies is to reduce selection of adapted Z. tritici isolates and consequently to prolong the efficacy of DMIs in STB management.
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    Publication
    In vivo und molekularbiologische Untersuchungen zur Sensitivität von Phakopsora pachyrhizi gegenüber Demethylierungs-Inhibitoren und Qo-Inhibitoren
    (2013) Schmitz, Helena Katharina; Vögele, Ralf
    Soybeans are one of the most important crops worldwide. Since 1980, soybean production attained increasing distinction in Brazil. Following the leading producer USA, Brazil counted as the second biggest soybean producer in 2010. A number of threats are involed reducing soybean yield, rating the Asian Soybean Rust, Phakopsora pachyhrizi, as one of the worst pathogens since its invasion in 2001. Until this date the American Soybean Rust, Phakopsora meibomiae, was known in Brazil only, which is of minor importance. Not only did P. pachyrhizi reduce soybean yield in Asia, but also in Brazil considerable additional costs were caused by yield reduction and disease management. Control is mainly based on fungicide treatment, demethylation inhibitors (DMI) and quinone outside inhibitors (QoI) being the most important and effective classes used. Both fungicide groups are frequently applied in combinations to ensure prolonged effects. While efficiency of QoIs remained unchanged, protection by DMIs was significantly narrowed. The primary objective of the recent study was to survey the sensitivity of P. pachyrhizi isolates towards fungicides and to analyse the genetical background of a conceivable adaption. Indeed, an adaption towards DMIs could be observed, while efficiency of QoIs was stable. Due to the P. pachyrhizi genetical structure of the cytochrome b (cyt b) gene, which corresponds to the QoI fungicide target protein, resistance towards QoIs based on the most important mechanism known from other pathogens is rather unlikely. The major resistance mechanism of phytopathogenic fungi against QoIs is an alteration of the cyt b-sequence, in particular point mutations F129L, G137R and G143A, whereas G143A results in highest resistance factors. An intron after codon 143 of the cyt b-gene prevents the development of G143A-mutation. In contrast, genetical analyses of the cyp51-gene, which corresponds to the target protein of DMI fungicides, revealed that adaption is based on different resistance mechanisms which have an additive or synergistic impact. In P. pachyrhizi, point mutations within the cyp51-gene and a modified expression of cyp51 were involved. An altered expression of cyp51 was due to a selective expression of a mutated cyp51-allele and due to up-regulation of cyp51. Six point mutations (F120L, Y131H, Y131F, K142R, I145F and I475T) which appeared in defined combinations, except for one mutation which was found as a single character, correspond to a reduced sensitivity. Additionaly, in some of the isolates cyp51 was up-regulated three- to thenfold compared to the reference strain, leading to decreased efficiency of DMIs. Indications were found, assuming that the copy number of the cyp51-gene in P. pachyrhizi is responsible for the observed alterations in the expression. Other resistance mechanisms than described in the recent study (such as expression of efflux transporters) may additionally play a role now or in future. Resistance towards DMIs evolved by P. pachyrhizi was caused by nesting mechanisms which appeared in quite a short time period due to enormous selection pressure by extensive DMI-use in large areas and the clonal, dicaryotic live cycle with short generation times. Thus, applications of fungicides with different modes of actions are recommended for management of P. pachyrhizi to prevent further resistance development and -distribution.